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Core Courses

  • Bioinformatics I:  Biological Data & Analysis Tools
    Pharmacology (Pharm 201)
    Course description:  Presentation of types of biological data, organization of data and use of analysis tools. Extensive use of web-based bioinformatics environments for investigation and analysis of biological data.


  • Bioinformatics II: Sequence and Structure Analysis - Methods and Applications
    Bioengineering (BENG 202/CSE 257A)
    Course Description:  Introduction to methods for sequence analysis.  Applications to genome and proteome sequences.  Protein Structure, sequence-structure analysis.


  • Bioinformatics III: Functional Genomics
    Bioengineering (BENG 203)
    Course description:  Annotating genomes, characterizing functional genes, profiling, reconstructing pathways.


  • Bioinformatics IV: Statistical Methods for Bioinformatics
    Mathematics (Math 283)
    Course description: This course will cover material related to the analysis of modern genomic data; sequence analysis, gene expression/functional genomics analysis, and gene mapping/applied population genetics.  This course will focus on statistical modeling and inference issues and not on database mining techniques
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Program Electives
(Each student will select from 5 of the 8 elective fields below. 1 must be from Biology field and 1 from Computer Science field. For each elective, multiple course options currently available are listed).

Elective 1 - Biochemistry
BENG230A
CHEM 213
CHEM 218

Elective 2- Data Structures
CSE204A

Elective 3- Algorithms
CSE 202

Elective 4- Information Retrieval, Databases & Data Mining
CSE 254

Elective 5 - Molecular Genetics
BGGN 220
BGGN 223

Elective 6 - Cell Biology
BGGN 222
BIEB 204
BIOMED 210
BIOMED 212

Elective 7- Physics and Engineering
BENG211
BENG212
BENG213
BENG253
BENG275
PHYS 210A

Elective 8 - Mathematics and Statistics
MATH 280A

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Last modified Wednesday, November 16, 2005